Docs and methods
Docs and methods
One page per app: the methods behind its numbers, what it lets you export, how its code is checked, and its security overview.
Drybench Protein.
How the protein app finds and lines up its data, what it lets you take away, how its code is checked and what it sends where.
Drybench Molecule.
How the molecule app computes its descriptors, scores, shapes and neighbours, what it lets you take away, how its chemistry is checked against Python RDKit and what it sends where.
Drybench Pipeline.
How the pipeline app queries ClinicalTrials.gov and openFDA, classifies modalities and builds the FDA precedent, what it lets you take away, how its code is checked and what it sends where.
Drybench Cell.
How the cell tour's structures, scenes, measurements and stills are made and checked, what it lets you take away, and what it sends where.
Drybench Patent.
How the patent app keeps the FDA's files, traces every date to its rule and row, what it lets you take away, how its code is checked and what it sends where.
Drybench Calc.
How the calculators turn inputs into masses, volumes, concentrations, pKa values and extinction coefficients, what they let you take away, how each module is checked against a named oracle, and what leaves your browser (nothing).
Drybench Sequence.
How the sequence app turns a paste into translations, ORFs, molecular weights, isoelectric points, extinction coefficients, melting temperatures and hairpin and dimer free energies, what it lets you take away, how each method is checked against a named oracle, and what stays local and what an explicit UniProt search sends.
Drybench Assay.
How the assay analyser turns a plate export into C50s with intervals, what it withholds and why, what it lets you take away, how the engine is checked against R and drc, and what leaves your browser (nothing).
Drybench Plasmid.
How the plasmid map turns a sequence into a map with library features, enzyme sites, methylation outcomes, primer sites, digests and bench numbers, what it lets you take away, how each method is checked against a named oracle, and what leaves your browser (only an accession you ask NCBI for).
Drybench Bioreactor.
How the bioreactor simulator sets up and solves a run, where its presets' values come from, how the rescue works, what you can take away, how the engine is checked against SciPy, and what leaves your browser (nothing).